LINEs (long
interspersed nuclear elements) are a non-LTR Retrotransposons, a type of genome-wide repeat, often
with transposable activity.
In
eukaryotes, these repetitive elements constitute a large portion of its genome.
There are about 850,000 repetitions of these, constituting about 21% of human
DNA.
Repetitive
sequences of the genome are classified into sub-divisions based on their size
and the SINEs (short interspersed elements), with a length between 100 and 300
pair of bases , and LINEs are the major classes of repeats.
LINEs have
a length between 4-6 kb and many sequences, smaller, whit about 1kb, derive
them. They’re replicated and propagated genome’s
components which propagate in genome by auto replication, moving to new
locations of DNA by a process called transposition.
These
sequences represent reverse-transcribed RNA molecules originally transcribed by
RNA polymerase II into mRNA and code for 2 proteins.
A typical
LINE (fig 1) contains a 2 ORFs (open reading frames), a 3′ UTR (untranslated
region), and 5′ UTR that contains an internal polymerase II promoter sequence,
while the 3′ UTR contains a polyadenylation signal (AATAAA) and a poly-A tail.
LINE -1 is
an example of a human LINE.
Their
function in cell is not known, such as SINEs.
Fig 1-The
components of a typical LINE. (5′ UTR, 2 ORFs and 3′ UTR with a polyadenylation signal (AATAAA)
).
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